#!usr/bin/perl open(DATA, "Stat1.wig"); open(OUTPUT, ">Stat1.bed"); my $thresh=20; %should change based on signal range and desired stringency while() { my @line=split/\s+/, $_; my $temp_sig=$line[3]; if ($temp_sig>$thresh){ print OUTPUT "$line[0]\t$line[1]\t$line[2]\n"; } } close(OUTPUT); close(DATA);