ACT

For aggregation, correlation, and saturation of signal tracks from genomic experiments

Overview [wiki] describing all ACT component tools and how to use them

Sample Data. Data used in the ACT paper are presented alongside their respective scripts. For some large example files from ChIP-seq data and explanation of how to use them with ACT, see: [wiki-integrated-example].

Frequently Asked Questions [FAQ] regarding ACT usage.

Citation: J Jee*, J Rozowsky*, KY Yip*, L Lochovsky, R Bjornson, G Zhong, Z Zhang, Y Fu, J Wang, Z Weng, M Gerstein. ACT: Aggregation and Correlation Toolbox for Analyses of Genome Tracks. (2011) Bioinformatics [pubmed]