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java.lang.Objectorg.gersteinlab.act.io.DataFilesReader
org.gersteinlab.act.io.NarrowPeakFilesReader
public class NarrowPeakFilesReader
This class defines a reader of data files in narrowPeak format. See http://www.genome.duke.edu/labs/furey/software/fseq/ for definition.
Field Summary |
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Fields inherited from class org.gersteinlab.act.io.DataFilesReader |
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br |
Constructor Summary | |
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NarrowPeakFilesReader(java.io.Reader rIn)
Create a new reader with source data from an input reader. |
Method Summary | |
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Interval |
readInterval()
Read the next interval from the reader. |
Methods inherited from class org.gersteinlab.act.io.DataFilesReader |
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close, countIntervals, getReader, readIntervals, readIntervals, reset |
Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public NarrowPeakFilesReader(java.io.Reader rIn)
rIn
- The input readerMethod Detail |
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public Interval readInterval() throws java.io.IOException
readInterval
in class DataFilesReader
java.io.IOException
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